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(2022) Abdominal Visceral Adipose Tissue Over the Menopause Transition and Carotid Atherosclerosis: The SWAN Heart Study Li, Tanya, et al

Briefly, it covered: a) removal of decoy hits and contaminant protein groups, b) protein group intensities log2 transformation, c) loessF normalization, d) quantitative filtering and global minimum imputation, e) differential expression using LIMMA statistical test

However, this comes with significant caveats